A framework for assessing interactions for risk stratification models: the example of ovarian cancer

Minh Tung Phung & Bhramar Mukherjee et al.

Abstract

Generally, risk stratification models for cancer use effect estimates from risk/protective factor analyses that have not assessed potential interactions between these exposures. We have developed a 4-criterion framework for assessing interactions that includes statistical, qualitative, biological, and practical approaches. We present the application of this framework in an ovarian cancer setting because this is an important step in developing more accurate risk stratification models. Using data from 9 case-control studies in the Ovarian Cancer Association Consortium, we conducted a comprehensive analysis of interactions among 15 unequivocal risk and protective factors for ovarian cancer (including 14 non-genetic factors and a 36-variant polygenic score) with age and menopausal status. Pairwise interactions between the risk/protective factors were also assessed. We found that menopausal status modifies the association among endometriosis, first-degree family history of ovarian cancer, breastfeeding, and depot-medroxyprogesterone acetate use and disease risk, highlighting the importance of understanding multiplicative interactions when developing risk prediction models.

Funding
Wellcome Trust Grant 076113NIH HHS Grant CA1X01HG007491-01Hereditary Breast Cancer: Genetic and Molecular StudiesCollaborative Genetic Study of Ovarian Cancer RiskGeneral Clinical Research CenterRegulatory T Cell Function in Ovarian CancerFollow-up of Ovarian Cancer Genetic Association and Interaction Studies (FOCI)Follow-up of Ovarian Cancer Genetic Association and Interaction Studies (FOCI)The Mitochondrial Genome and Ovarian Cancer RiskWellcome Trust FundingCancer Research Training and Education CoordinationEpidemiology of Ovarian Cancer:New HypothesesESTROGEN, DIET, GENETICS AND ENDOMETRIAL CANCERProject 1Dana-Farber/Harvard Cancer Center Ovarian Cancer SPOREInflammation and Ovarian CancerPhytoestrogens, alcohol, and endometrial cancer riskPathologyGenes, Hormones & Environment in an Ovarian Cancer ModelSteroid Hormone Genes and Ovarian Cancer RiskCancer Center AdministrationOVARIAN CANCER RISK AND SURVIVAL IN BRCA CARRIERSObesity in ovarian cancer prognosisNHGRI NIH HHS FundingOvarian Cancer Association Consortium FundingOvarian Cancer Research Fund Grant PPD/RPCI.07Follow-up of Ovarian Cancer Genetic Association and Interaction Studies (FOCI)National Cancer Institute FundingNational Human Genome Research Institute FundingUS National Institutes of Health Grant CA1X01HG007491-01Follow-up of Ovarian Cancer Genetic Association and Interaction Studies (FOCI)The Mitochondrial Genome and Ovarian Cancer RiskCollaborative Genetic Study of Ovarian Cancer RiskCanadian Institutes of Health Research Grant MOP-86727Ovarian Cancer Research Fund FundingArmy Medical Research and Materiel Command Grant DAMD17-01-1-0729National Health & Medical Research Council of Australia Grant 199600National Health & Medical Research Council of Australia Grant 400413National Health & Medical Research Council of Australia Grant 400281Cancer Councils of New South Wales FundingCancer Foundation of Western Australia FundingAstraZeneca Funding

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