Targeting CCNE1 amplified ovarian and endometrial cancers by combined inhibition of PKMYT1 and ATR

Haineng Xu & Fiona Simpkins et al. · 2025-04-01

Abstract

Ovarian cancers (OVCAs) and endometrial cancers (EMCAs) with CCNE1- amplification are often resistant to standard treatment and represent an unmet clinical need. Synthetic-lethal screening identified loss of the CDK1 regulator, PKMYT1, as synthetically lethal with CCNE1 -amplification. We hypothesize that CCNE1 -amplification associated replication stress will be more effectively targeted by combining PKMYT1 inhibitor lunresertib (RP-6306), with ATR inhibitor camonsertib (RP-3500/RG6526). Low dose combination RP-6306 with RP-3500 synergistically increases cytotoxicity more so in CCNE1 -amplified compared to non-amplified cells. Combination treatment produces durable antitumor activity, reduces metastasis and increases survival in CCNE1 -amplified patient-derived OVCA and EMCA xenografts. Mechanistically, low doses of RP-6306 with RP-3500 increase CDK1 activation more so than monotherapy, triggering rapid and robust induction of premature mitosis, DNA damage, and apoptosis in a CCNE1 -dependent manner. These findings suggest that targeting CDK1 activity by combining RP-6306 with RP-3500 is an effective therapeutic approach to treat CCNE1 -amplifed OVCAs and EMCAs.

Funding
University of Pennsylvania Patient-derived Xenograft Development and Trials CenterRoles of Chromatin Modification in BRCA1 Dependent DNA RepairA novel more effective genotoxic therapy for ovarian cancerProject 3: Investigating new treatment approaches based on DNA repair vulnerability in ARID1A mutated type I ovarian cancerA novel more effective genotoxic therapy for ovarian cancerOvercoming treatment-resistant gynecological cancers by combination of DNA damage response inhibitorsProject 3: Investigating new treatment approaches based on DNA repair vulnerability in ARID1A mutated type I ovarian cancerUniversity of Pennsylvania Patient-derived Xenograft Development and Trials CenterOvercoming treatment-resistant gynecological cancers by combination of DNA damage response inhibitorsFoundation for Women’s Cancer Funding

U.S. Department of Health & Human Services | NIH | National Cancer Institute (NCI)

1U54CA283759-01

NCI NIH HHS

R01 CA174904

NCI NIH HHS

R37 CA215436

NCI NIH HHS

P50 CA228991

U.S. Department of Health & Human Services | NIH | National Cancer Institute (NCI)

5R37CA215436-06

NCI NIH HHS

R50 CA283807

U.S. Department of Health & Human Services | NIH | National Cancer Institute (NCI)

5-P50-CA-228991-04

NCI NIH HHS

U54 CA283759

U.S. Department of Health & Human Services | NIH | National Cancer Institute (NCI)

1 R50CA283807-01A1

U.S. Department of Health & Human Services | NIH | National Cancer Institute

5R37CA215436-06

U.S. Department of Health & Human Services | NIH | National Cancer Institute

5-P50-CA-228991-04

U.S. Department of Health & Human Services | NIH | National Cancer Institute

1U54CA283759-01

U.S. Department of Health & Human Services | NIH | National Cancer Institute

1 R50CA283807-01A1