Genomic Validation of Endometrial Cancer Patient-Derived Xenograft Models as a Preclinical Tool

Beatriz Villafranca-Magdalena & Cristian P. Moiola et al. · 2022-06-03

Endometrial cancer (EC) is the second most frequent gynecological cancer worldwide. Although improvements in EC classification have enabled an accurate establishment of disease prognosis, women with a high-risk or recurrent EC face a dramatic situation due to limited further treatment options. Therefore, new strategies that closely mimic the disease are required to maximize drug development success. Patient-derived xenografts (PDXs) are widely recognized as a physiologically relevant preclinical model. Hence, we propose to molecularly and histologically validate EC PDX models. To reveal the molecular landscape of PDXs generated from 13 EC patients, we performed histological characterization and whole-exome sequencing analysis of tumor samples. We assessed the similarity between PDXs and their corresponding patient’s tumor and, additionally, to an extended cohort of EC patients obtained from The Cancer Genome Atlas (TCGA). Finally, we performed functional enrichment analysis to reveal differences in molecular pathway activation in PDX models. We demonstrated that the PDX models had a well-defined and differentiated molecular profile that matched the genomic profile described by the TCGA for each EC subtype. Thus, we validated EC PDX’s potential to reliably recapitulate the majority of histologic and molecular EC features. This work highlights the importance of a thorough characterization of preclinical models for the improvement of the success rate of drug-screening assays for personalized medicine.

Funding
Instituto de Salud Carlos III Grant PI17/02071Instituto de Salud Carlos III Grant PI20/01566Instituto de Salud Carlos III Grant RTC-2017-6261-1Instituto de Salud Carlos III Grant GCTRA1804MATIInstituto de Salud Carlos III Grant INVES20051COLAInstituto de Salud Carlos III Grant CB16/12/00328Instituto de Salud Carlos III Grant 2017SGR1661Instituto de Salud Carlos III Grant PERIS-SLT017/20/000183Ministerio de ciencia, Innovación y Universidades Grant PI17/02071Ministerio de ciencia, Innovación y Universidades Grant PI20/01566Ministerio de ciencia, Innovación y Universidades Grant RTC-2017-6261-1Ministerio de ciencia, Innovación y Universidades Grant GCTRA1804MATIMinisterio de ciencia, Innovación y Universidades Grant INVES20051COLAMinisterio de ciencia, Innovación y Universidades Grant CB16/12/00328Ministerio de ciencia, Innovación y Universidades Grant 2017SGR1661Ministerio de ciencia, Innovación y Universidades Grant PERIS-SLT017/20/000183European Regional Development Fund (FEDER) Grant PI17/02071European Regional Development Fund (FEDER) Grant PI20/01566European Regional Development Fund (FEDER) Grant RTC-2017-6261-1European Regional Development Fund (FEDER) Grant GCTRA1804MATIEuropean Regional Development Fund (FEDER) Grant INVES20051COLAEuropean Regional Development Fund (FEDER) Grant CB16/12/00328European Regional Development Fund (FEDER) Grant 2017SGR1661European Regional Development Fund (FEDER) Grant PERIS-SLT017/20/000183Fundación Científica Asociación Española Contra el Cáncer (AECC) Grant PI17/02071Fundación Científica Asociación Española Contra el Cáncer (AECC) Grant PI20/01566Fundación Científica Asociación Española Contra el Cáncer (AECC) Grant RTC-2017-6261-1Fundación Científica Asociación Española Contra el Cáncer (AECC) Grant GCTRA1804MATIFundación Científica Asociación Española Contra el Cáncer (AECC) Grant INVES20051COLAFundación Científica Asociación Española Contra el Cáncer (AECC) Grant CB16/12/00328Fundación Científica Asociación Española Contra el Cáncer (AECC) Grant 2017SGR1661Fundación Científica Asociación Española Contra el Cáncer (AECC) Grant PERIS-SLT017/20/000183Biomedical Research Center Network (CIBERONC) Grant PI17/02071Biomedical Research Center Network (CIBERONC) Grant PI20/01566Biomedical Research Center Network (CIBERONC) Grant RTC-2017-6261-1Biomedical Research Center Network (CIBERONC) Grant GCTRA1804MATIBiomedical Research Center Network (CIBERONC) Grant INVES20051COLABiomedical Research Center Network (CIBERONC) Grant CB16/12/00328Biomedical Research Center Network (CIBERONC) Grant 2017SGR1661Biomedical Research Center Network (CIBERONC) Grant PERIS-SLT017/20/000183Generalitat de Catalunya Grant PI17/02071Generalitat de Catalunya Grant PI20/01566Generalitat de Catalunya Grant RTC-2017-6261-1Generalitat de Catalunya Grant GCTRA1804MATIGeneralitat de Catalunya Grant INVES20051COLAGeneralitat de Catalunya Grant CB16/12/00328Generalitat de Catalunya Grant 2017SGR1661Generalitat de Catalunya Grant PERIS-SLT017/20/000183