Targeting the IRE1α/XBP1 Endoplasmic Reticulum Stress Response Pathway in ARID1A -Mutant Ovarian Cancers

Joseph A. Zundell & Rugang Zhang et al. · 2021-09-21

Abstract

The SWI/SNF chromatin-remodeling complex is frequently altered in human cancers. For example, the SWI/SNF component ARID1A is mutated in more than 50% of ovarian clear cell carcinomas (OCCC), for which effective treatments are lacking. Here, we report that ARID1A transcriptionally represses the IRE1α–XBP1 axis of the endoplasmic reticulum (ER) stress response, which confers sensitivity to inhibition of the IRE1α–XBP1 pathway in ARID1A-mutant OCCC. ARID1A mutational status correlated with response to inhibition of the IRE1α–XBP1 pathway. In a conditional Arid1aflox/flox/Pik3caH1047R genetic mouse model, Xbp1 knockout significantly improved survival of mice bearing OCCCs. Furthermore, the IRE1α inhibitor B-I09 suppressed the growth of ARID1A-inactivated OCCCs in vivo in orthotopic xenograft, patient-derived xenograft, and the genetic mouse models. Finally, B-I09 synergized with inhibition of HDAC6, a known regulator of the ER stress response, in suppressing the growth of ARID1A-inactivated OCCCs. These studies define the IRE1α−XBP1 axis of the ER stress response as a targetable vulnerability for ARID1A-mutant OCCCs, revealing a promising therapeutic approach for treating ARID1A-mutant ovarian cancers.

Significance:

These findings indicate that pharmacological inhibition of the IRE1α–XBP1 pathway alone or in combination with HDAC6 inhibition represents an urgently needed therapeutic strategy for ARID1A-mutant ovarian cancers.

Funding
Targeting ER stress response in B-cell chronic lymphocytic leukemiaQuantitative assessment of the role of collagen alterations in ovarian cancerProject 3: Investigating new treatment approaches based on DNA repair vulnerability in ARID1A mutated type I ovarian cancerIntegrative Approach to Comprehensive Analysis of High Throughput Data on a Cancer Center LevelMechanistic basis and therapeutic strategies for ARID1A mutation in ovarian cancerTargeting EZH2 in CARM1-expressing epithelial ovarian cancerSynthetic lethality based combination approaches to ARID1A mutation in ovarian cancerMetabolic basis of ARID1A-mutated ovarian cancerPharmacological Blockage of XBP-1s Expression in CancerTargeting the ER Stress Response in ARID1A-mutant Ovarian Clear Cell CarcinomaAnimal Shared ResourceMechanistic basis and therapeutic strategies for ARID1A mutation in ovarian cancerSynthetic lethality based combination approaches to ARID1A mutation in ovarian cancerMetabolic basis of ARID1A-mutated ovarian cancerProject 3: Investigating new treatment approaches based on DNA repair vulnerability in ARID1A mutated type I ovarian cancerTargeting ER stress response in B-cell chronic lymphocytic leukemiaPharmacological Blockage of XBP-1s Expression in CancerTargeting the ER Stress Response in ARID1A-mutant Ovarian Clear Cell CarcinomaU.S. Department of Defense Grant OC180109Department of Defense Grant OC190181Honorable Tina Brozman Foundation for Ovarian Cancer Research FundingTina Brozman Ovarian Cancer Research Consortium 2.0 FundingOvarian Cancer Research Alliance Grant #596552Ovarian Cancer Research Alliance Grant 649658Cancer Center Support Grant CA010815The Wistar Institute Funding

NCI NIH HHS

R01 CA163910

NCI NIH HHS

R01 CA206561

NCI NIH HHS

P50 CA228991

NCI NIH HHS

R50 CA211199

NCI NIH HHS

R01 CA202919

NCI NIH HHS

R01 CA163377

NCI NIH HHS

R01 CA239128

NCI NIH HHS

R01 CA260661

NCI NIH HHS

R01 CA190860

NCI NIH HHS

F31 CA247336

NCI NIH HHS

P30 CA010815

National Institutes of Health

R01CA202919

National Institutes of Health

R01CA239128

National Institutes of Health

R01CA260661

National Institutes of Health

P50CA228991

National Institutes of Health

R01CA163910

National Institutes of Health

R01CA190860

National Institutes of Health

F31CA247336

Ovarian Cancer Research Alliance

#649658